PGC Psychiatric GWAS Summary Statistics
Collection
~1 billion rows of genome-wide association study (GWAS) summary statistics from the Psychiatric Genomics Consortium (PGC). • 12 items • Updated • 33
snpid stringlengths 3 10 | hg18chr int64 1 22 | bp int64 3.59k 247M | a1 stringclasses 3
values | a2 stringclasses 3
values | zscore float64 -4.66 4.87 | pval float64 0 1 | CEUmaf stringclasses 486
values | _source_file stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|
rs3131972 | 1 | 742,584 | A | G | 0.289 | 0.7726 | . | pgc.adhd.full.2012-10.txt.gz |
rs3131969 | 1 | 744,045 | A | G | 0.393 | 0.6946 | . | pgc.adhd.full.2012-10.txt.gz |
rs3131967 | 1 | 744,197 | T | C | 0.443 | 0.658 | . | pgc.adhd.full.2012-10.txt.gz |
rs1048488 | 1 | 750,775 | T | C | -0.289 | 0.7726 | . | pgc.adhd.full.2012-10.txt.gz |
rs12562034 | 1 | 758,311 | A | G | -1.552 | 0.1207 | 0.09167 | pgc.adhd.full.2012-10.txt.gz |
rs4040617 | 1 | 769,185 | A | G | -0.414 | 0.6786 | 0.875 | pgc.adhd.full.2012-10.txt.gz |
rs4970383 | 1 | 828,418 | A | C | 0.214 | 0.8303 | . | pgc.adhd.full.2012-10.txt.gz |
rs4475691 | 1 | 836,671 | T | C | -0.604 | 0.5461 | . | pgc.adhd.full.2012-10.txt.gz |
rs1806509 | 1 | 843,817 | A | C | -0.262 | 0.7933 | . | pgc.adhd.full.2012-10.txt.gz |
rs7537756 | 1 | 844,113 | A | G | 0.373 | 0.7092 | . | pgc.adhd.full.2012-10.txt.gz |
rs13302982 | 1 | 851,671 | A | G | -0.871 | 0.3837 | . | pgc.adhd.full.2012-10.txt.gz |
rs4040604 | 1 | 852,987 | T | G | 0.871 | 0.3837 | . | pgc.adhd.full.2012-10.txt.gz |
rs2340587 | 1 | 854,801 | A | G | 0.971 | 0.3313 | . | pgc.adhd.full.2012-10.txt.gz |
rs28576697 | 1 | 860,508 | T | C | -0.531 | 0.5952 | . | pgc.adhd.full.2012-10.txt.gz |
rs1110052 | 1 | 863,421 | T | G | 0.06 | 0.9521 | . | pgc.adhd.full.2012-10.txt.gz |
rs7523549 | 1 | 869,180 | T | C | 0.942 | 0.3464 | . | pgc.adhd.full.2012-10.txt.gz |
rs3748592 | 1 | 870,101 | A | G | 0.386 | 0.6994 | . | pgc.adhd.full.2012-10.txt.gz |
rs3748593 | 1 | 870,253 | A | C | 0.864 | 0.3876 | . | pgc.adhd.full.2012-10.txt.gz |
rs2272756 | 1 | 871,896 | A | G | -0.302 | 0.7623 | 0.2583 | pgc.adhd.full.2012-10.txt.gz |
rs2340582 | 1 | 872,666 | A | G | 0.386 | 0.6994 | . | pgc.adhd.full.2012-10.txt.gz |
rs4246503 | 1 | 874,678 | A | G | 0.386 | 0.6994 | . | pgc.adhd.full.2012-10.txt.gz |
rs3748594 | 1 | 876,247 | A | G | 0.851 | 0.3948 | . | pgc.adhd.full.2012-10.txt.gz |
rs3748595 | 1 | 877,423 | A | C | -0.071 | 0.9433 | . | pgc.adhd.full.2012-10.txt.gz |
rs13303106 | 1 | 881,808 | A | G | 0.261 | 0.7938 | . | pgc.adhd.full.2012-10.txt.gz |
rs28415373 | 1 | 883,844 | T | C | 0.995 | 0.3198 | . | pgc.adhd.full.2012-10.txt.gz |
rs13303010 | 1 | 884,436 | A | G | -0.572 | 0.5674 | . | pgc.adhd.full.2012-10.txt.gz |
rs3935066 | 1 | 890,593 | A | G | -1.147 | 0.2515 | . | pgc.adhd.full.2012-10.txt.gz |
rs6696281 | 1 | 892,967 | T | C | 0.524 | 0.6006 | . | pgc.adhd.full.2012-10.txt.gz |
rs28391282 | 1 | 894,028 | A | G | 0.82 | 0.4125 | . | pgc.adhd.full.2012-10.txt.gz |
rs28695703 | 1 | 894,218 | T | C | -0.927 | 0.3539 | . | pgc.adhd.full.2012-10.txt.gz |
rs28504611 | 1 | 898,277 | T | C | -0.466 | 0.6415 | . | pgc.adhd.full.2012-10.txt.gz |
rs6694632 | 1 | 906,697 | A | G | 0.622 | 0.5338 | . | pgc.adhd.full.2012-10.txt.gz |
rs13303118 | 1 | 908,247 | T | G | 0.977 | 0.3284 | . | pgc.adhd.full.2012-10.txt.gz |
rs2341354 | 1 | 908,436 | A | G | -0.778 | 0.4364 | 0.425 | pgc.adhd.full.2012-10.txt.gz |
rs6665000 | 1 | 914,761 | A | C | -0.607 | 0.544 | . | pgc.adhd.full.2012-10.txt.gz |
rs4970403 | 1 | 916,294 | A | T | 0.618 | 0.5363 | 0.98333 | pgc.adhd.full.2012-10.txt.gz |
rs2341362 | 1 | 917,172 | T | C | 0.607 | 0.544 | . | pgc.adhd.full.2012-10.txt.gz |
rs9777703 | 1 | 918,699 | T | C | -0.607 | 0.544 | . | pgc.adhd.full.2012-10.txt.gz |
rs1891910 | 1 | 922,320 | A | G | -2.01 | 0.04442 | . | pgc.adhd.full.2012-10.txt.gz |
rs9697457 | 1 | 924,208 | A | G | -0.701 | 0.483 | . | pgc.adhd.full.2012-10.txt.gz |
rs35940137 | 1 | 930,066 | A | G | -0.402 | 0.6879 | . | pgc.adhd.full.2012-10.txt.gz |
rs3121567 | 1 | 933,331 | T | C | 0.526 | 0.599 | . | pgc.adhd.full.2012-10.txt.gz |
rs3128117 | 1 | 934,427 | T | C | 1.818 | 0.06899 | . | pgc.adhd.full.2012-10.txt.gz |
rs2465126 | 1 | 936,897 | A | G | -1.436 | 0.1509 | 0.98333 | pgc.adhd.full.2012-10.txt.gz |
rs2341365 | 1 | 938,555 | A | G | -1.155 | 0.2481 | . | pgc.adhd.full.2012-10.txt.gz |
rs15842 | 1 | 938,784 | T | C | 1.373 | 0.1698 | . | pgc.adhd.full.2012-10.txt.gz |
rs1891906 | 1 | 940,106 | A | C | 2.018 | 0.0436 | . | pgc.adhd.full.2012-10.txt.gz |
rs6657048 | 1 | 947,503 | T | C | 0.145 | 0.8845 | . | pgc.adhd.full.2012-10.txt.gz |
rs2710888 | 1 | 949,705 | T | C | -1.126 | 0.26 | . | pgc.adhd.full.2012-10.txt.gz |
rs2710875 | 1 | 967,643 | T | C | 0.641 | 0.5217 | . | pgc.adhd.full.2012-10.txt.gz |
rs9331225 | 1 | 967,909 | T | C | -1.088 | 0.2764 | . | pgc.adhd.full.2012-10.txt.gz |
rs17160776 | 1 | 975,763 | T | C | 0.171 | 0.8644 | . | pgc.adhd.full.2012-10.txt.gz |
rs9803031 | 1 | 977,063 | T | C | 0.337 | 0.7363 | . | pgc.adhd.full.2012-10.txt.gz |
rs13303287 | 1 | 977,533 | T | G | -0.133 | 0.8943 | . | pgc.adhd.full.2012-10.txt.gz |
rs9778201 | 1 | 979,324 | A | G | -0.329 | 0.7425 | . | pgc.adhd.full.2012-10.txt.gz |
rs2465136 | 1 | 980,280 | T | C | 2.271 | 0.02316 | 0.725 | pgc.adhd.full.2012-10.txt.gz |
rs2488991 | 1 | 984,254 | T | G | 0.391 | 0.6961 | . | pgc.adhd.full.2012-10.txt.gz |
rs7526076 | 1 | 988,258 | A | G | -0.864 | 0.3873 | . | pgc.adhd.full.2012-10.txt.gz |
rs3934834 | 1 | 995,669 | T | C | -0.692 | 0.4892 | 0.1186 | pgc.adhd.full.2012-10.txt.gz |
rs3766192 | 1 | 1,007,060 | T | C | 1.833 | 0.06673 | 0.5763 | pgc.adhd.full.2012-10.txt.gz |
rs3766191 | 1 | 1,007,450 | T | C | -0.441 | 0.6593 | 0.09649 | pgc.adhd.full.2012-10.txt.gz |
rs9442372 | 1 | 1,008,567 | A | G | -1.695 | 0.09007 | 0.3983 | pgc.adhd.full.2012-10.txt.gz |
rs10907177 | 1 | 1,011,209 | A | G | 0.678 | 0.4977 | 0.8729 | pgc.adhd.full.2012-10.txt.gz |
rs3737728 | 1 | 1,011,278 | A | G | -1.367 | 0.1716 | 0.2833 | pgc.adhd.full.2012-10.txt.gz |
rs9442398 | 1 | 1,011,558 | A | G | -0.987 | 0.3236 | 0.275 | pgc.adhd.full.2012-10.txt.gz |
rs6689308 | 1 | 1,019,668 | A | G | 0.338 | 0.7355 | . | pgc.adhd.full.2012-10.txt.gz |
rs6687776 | 1 | 1,020,428 | T | C | -0.174 | 0.8616 | 0.08333 | pgc.adhd.full.2012-10.txt.gz |
rs6678318 | 1 | 1,020,496 | A | G | -0.147 | 0.8831 | 0.08621 | pgc.adhd.full.2012-10.txt.gz |
rs9651273 | 1 | 1,021,403 | A | G | -1.933 | 0.05325 | 0.3417 | pgc.adhd.full.2012-10.txt.gz |
rs11260595 | 1 | 1,028,961 | A | C | 0.583 | 0.5598 | 0.98333 | pgc.adhd.full.2012-10.txt.gz |
rs6671356 | 1 | 1,029,889 | T | C | 0.376 | 0.7069 | 0.925 | pgc.adhd.full.2012-10.txt.gz |
rs6604968 | 1 | 1,031,563 | A | G | 0.345 | 0.73 | 0.06667 | pgc.adhd.full.2012-10.txt.gz |
rs4970405 | 1 | 1,038,818 | A | G | 0.448 | 0.6541 | 0.94828 | pgc.adhd.full.2012-10.txt.gz |
rs12726255 | 1 | 1,039,813 | A | G | 0.209 | 0.8344 | 0.93333 | pgc.adhd.full.2012-10.txt.gz |
rs4970409 | 1 | 1,043,315 | A | G | -0.24 | 0.8107 | . | pgc.adhd.full.2012-10.txt.gz |
rs17160824 | 1 | 1,050,471 | A | G | -0.321 | 0.748 | 0.05833 | pgc.adhd.full.2012-10.txt.gz |
rs11807848 | 1 | 1,051,029 | T | C | 1.371 | 0.1703 | 0.5877 | pgc.adhd.full.2012-10.txt.gz |
rs12757754 | 1 | 1,051,125 | A | G | 0.387 | 0.6987 | . | pgc.adhd.full.2012-10.txt.gz |
rs9442373 | 1 | 1,052,501 | A | C | 1.522 | 0.1281 | 0.5517 | pgc.adhd.full.2012-10.txt.gz |
rs2298217 | 1 | 1,054,842 | T | C | -0.111 | 0.9118 | 0.08333 | pgc.adhd.full.2012-10.txt.gz |
rs12145826 | 1 | 1,055,892 | A | G | -0.097 | 0.9227 | 0.1034 | pgc.adhd.full.2012-10.txt.gz |
rs9442380 | 1 | 1,077,546 | T | C | 0.204 | 0.838 | 0.08772 | pgc.adhd.full.2012-10.txt.gz |
rs7553429 | 1 | 1,080,420 | A | C | -0.584 | 0.5589 | . | pgc.adhd.full.2012-10.txt.gz |
rs4970362 | 1 | 1,084,601 | A | G | -1.868 | 0.06175 | 0.3333 | pgc.adhd.full.2012-10.txt.gz |
rs9660710 | 1 | 1,089,205 | A | C | -0.374 | 0.7086 | 0.05932 | pgc.adhd.full.2012-10.txt.gz |
rs4970420 | 1 | 1,096,336 | A | G | 1.351 | 0.1766 | 0.1441 | pgc.adhd.full.2012-10.txt.gz |
rs4442317 | 1 | 1,096,647 | T | C | -1.289 | 0.1974 | . | pgc.adhd.full.2012-10.txt.gz |
rs4970421 | 1 | 1,098,500 | A | G | 0.519 | 0.6036 | . | pgc.adhd.full.2012-10.txt.gz |
rs11260542 | 1 | 1,099,882 | A | G | -1.427 | 0.1537 | 0.9 | pgc.adhd.full.2012-10.txt.gz |
rs9442387 | 1 | 1,100,449 | T | C | -1.713 | 0.08671 | . | pgc.adhd.full.2012-10.txt.gz |
rs12092254 | 1 | 1,102,984 | A | G | 1.561 | 0.1185 | 0.1 | pgc.adhd.full.2012-10.txt.gz |
rs1320565 | 1 | 1,109,721 | T | C | 0.214 | 0.8309 | 0.09167 | pgc.adhd.full.2012-10.txt.gz |
rs1320571 | 1 | 1,110,294 | A | G | 0.146 | 0.8841 | 0.04167 | pgc.adhd.full.2012-10.txt.gz |
rs3813204 | 1 | 1,110,877 | A | G | -0.377 | 0.7064 | 0.1121 | pgc.adhd.full.2012-10.txt.gz |
rs4297230 | 1 | 1,111,204 | T | C | -0.54 | 0.5892 | . | pgc.adhd.full.2012-10.txt.gz |
rs11260549 | 1 | 1,111,657 | A | G | -0.477 | 0.6332 | 0.125 | pgc.adhd.full.2012-10.txt.gz |
rs4314833 | 1 | 1,111,887 | T | C | 0.487 | 0.6265 | . | pgc.adhd.full.2012-10.txt.gz |
rs11260554 | 1 | 1,119,535 | T | G | -0.457 | 0.6474 | 0.125 | pgc.adhd.full.2012-10.txt.gz |
rs11260556 | 1 | 1,120,069 | A | G | -0.023 | 0.9819 | . | pgc.adhd.full.2012-10.txt.gz |
rs10907175 | 1 | 1,120,590 | A | C | -0.463 | 0.6432 | 0.9 | pgc.adhd.full.2012-10.txt.gz |
Genome-wide association study (GWAS) summary statistics for Attention Deficit Hyperactivity Disorder phenotypes from the Psychiatric Genomics Consortium (PGC).
Each publication is available as a separate subset (config) and can be loaded independently.
from datasets import load_dataset
# Load a specific GWAS
ds = load_dataset("OpenMed/pgc-adhd", "adhd2010")
print(ds)
from datasets import get_dataset_config_names
print(get_dataset_config_names("OpenMed/pgc-adhd"))
| Config | Phenotype | Journal | Year | PubMed | Rows |
|---|---|---|---|---|---|
adhd2010 |
ADHD | JAACAP | 2010 | 20732625 | — |
adhd2018_SexSpecific |
ADHD (Sex-Specific) | Biological Psychiatry | 2018 | 29325848 | — |
adhd2019 |
ADHD | Nature Genetics | 2019 | 30478444 | — |
adhd2022 |
ADHD | Nature Genetics | 2022 | 36702997 | — |
All data is stored as Apache Parquet shards (10,000 rows each). Common columns:
| Column | Description |
|---|---|
SNP / ID |
SNP rsID or variant identifier |
CHR |
Chromosome |
BP / POS |
Base-pair position (typically GRCh37/hg19) |
A1 |
Effect allele |
A2 |
Non-effect allele |
OR / BETA |
Odds ratio or effect size |
SE |
Standard error |
P |
P-value |
_source_file |
Original source filename |
Column names vary between publications. Check each subset's schema.
Please cite the original publication (see PubMed links above) and acknowledge the PGC:
Data were obtained from the Psychiatric Genomics Consortium — https://pgc.unc.edu/
Released under CC BY 4.0.
Last updated: April 2026